
We apply our expertise in #Statistics and #ML to help answer principal questions in #microbiology and #microbiome. Part of @LMU_Muenchen and @HelmholtzMunich.
Munich, DE
Joined April 2021
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🎉 Had a blast at #ISMBECCB2023 last week!
So many inspiring talks, awesome posters and... stairs in Lyon 🇫🇷😃
Excited to put all the amazing ideas we came up with into action!💡🚀
#microbiome #datascience @HelmholtzMunich @LMU_Muenchen
📊 Unveiling Stable Interactions in High-Throughput data!
💡@StadlerMara introduce #robust #statistical workflow:
🔗 Application to interaction effects between chromatin modifications
🧬 Lasso model for hierarchical interactions
🔎 Stability-based model selection
#ISMBECCB2023
🔬✨ Introducing MolE!
Join @Scietwas to witness MolE's empowering chemical compound #analysis 🌐🌟
⚙️ Molecular representation learned through embedding decorrelation
✨ Predicted growth-inhibitory effects against human gut pathogens
#ML #antimicrobial #resistance #ISMBECCB2023
🔍Discover the power of PIMs (compositional power interaction models) in handling @HiTSeq data! 🧬
@JohannesOstner showcases PIMs' capabilities in DA testing with correlated features while respecting zero inflation and compositional constraints 📈🎯 #ISMBECCB2023
🌐Join Viet Tran in Overcoming Statistical Challenges in Microbiome and Single Cell Research! 🏆🧪
📈Innovative Two-Stage Workflow:
1️⃣Hierarchical grouping of microbial or cell-type features
2️⃣Explicit handling of non-compositional covariates
#microbiome #singlecell #ISMBECCB2023
🔬🌿 Reproducible #microbiome #dataanalysis with #QIIME2 🐍 #python!
🔍 q2-gglasso: Sparse microbial network estimation
📈 q2-classo: Sparse log-contrast regression and classification
Join @ovlasovets @microbiome_cosi to hear more about #openscience and #softwaredevelopment🚀💻
🦠Unlocking Hierarchical Relationships in Viral #Metagenomic Data with #VirNest! 🧬
1️⃣ Virus gene-sharing network estimation by leveraging hierarchical protein association
2️⃣ Hierarchical partitions through nested stochastic block model
Join @DanielePugno in unveiling #microbiome
Discover the power of #NetCoMi, the #R package disentangling microbial association #networks! 📊🔬
🦠 Understand complex #microbial interactions
🌱 Statistical network estimation made easy
🔍 Unveil the differences between groups
Don't miss a showcase made by @stefpeschel ⭐
🔬 Today was an incredible day at @deng_lab!
Huge thanks to @JinlongRu, @KhanMirzaei, @Scietwas, @soph_eliza94, and @DanielePugno for sharing their expertise. Looking forward to new collaborations and more exciting discussions in the future🙌
#virome #microbiome @HelmholtzMunich
Our lab @IEM_Augsburg in Universität Klinikum #Augsburg. We SAW where skin #microbiome data comes from, and now will think twice before "df.dropna()" any samples🙀. Big thanks to @amedeodetomassi for an amazing lab tour, Luise Rauer and their colleagues for making it possible😎👍









