Neurosurgery Clinical Imaging Research Officer at Royal Children's Hospital, Melbourne. She/They. 🏳️🌈
Melbourne, Australia
Joined November 2014
- Tweets187
- Following221
- Followers218
- Likes160
Bonnie Alexander retweeted
Our new paper on "Karawun", a software that converts track files (.tck) to DICOM. This allows advanced tractography to be leveraged for presurgical planning and be displayed and used during neurosurgery. link.springer.com/article/10…
Our M-CRIB-WM neonatal parcellated white matter atlas has just been published: onlinelibrary.wiley.com/doi/…, and the ten individual parcellated datasets are publicly available here: osf.io/mnwv9/
This atlas contains 54 manually parcellated white matter regions, & is also downloadable combined with the M-CRIB 2.0 whole-brain atlas. Huge thanks to Sarah Yao and everyone involved @claireekelly_ @garedaba @L1L_BRAIN @ParkvilleGeek @ProfLexDoyle @AliciaSpittle @DeanneThompson
Bonnie Alexander retweeted
Our new paper on regional brain growth in children born very preterm & at term is the culmination of 15 years work from our amazing team! rdcu.be/b1bsl
@L1L_BRAIN @BonnieAlexandr @claireekelly_ @DrGiraffeBird @m_spencersmith @ParkvilleGeek
@ProfLexDoyle @CREnewborn
Our new @NatureComms paper on regional brain growth in children born very preterm and at term. A huge collaborative effort by @DeanneThompson & @L1L_BRAIN @claireekelly_ @DrGiraffeBird @m_spencersmith @ParkvilleGeek @ProfLexDoyle @CREnewborn nature.com/articles/s41467-0…
In neurosurgical planning, there hasn't been a way to convert state-of-the-art #MRtrix tractography #nifti & tract files to #dicom for use in #Brainlab surgical planning software. So Richard Beare & Joseph Yang have made a free tool, 'Karawun', to do that github.com/DevelopmentalImag…
Here's a screenshot of some converted test #MRtrix #diffusion #tractography data included in the Karawun package, displayed in #Brainlab.
Hi again #neonatal #neuroimaging and #parcellation folks! Here are newly-publicly-downloadable individual whole-brain parcellations for our *original* M-CRIB neonatal brain atlas: osf.io/2yx8u/. (1/2)
These parcellations have cortical regions compatible with the widely-used Desikan-Killiany (2006) adult brain atlas. The cortical regions in our M-CRIB 2.0 atlas (downloadable here osf.io/4vthr/) are compatible with the Desikan-Killiany-Tourville (2012) adult atlas.
Hey #neonatal #parcellation and #developmental #neuroimaging folks! Here is our newly-publicly-downloadable M-CRIB 2.0 neonatal parcellated brain atlas: osf.io/4vthr/ 🧠✨ Ten individual whole-brain parcellations, T2, and T1 images available, and more to be added soon.
Thanks @L1L_BRAIN, @DrGiraffeBird, @ParkvilleGeek, @AliciaSpittle, @SimonWarfield and all other coauthors (all not on twitter??) for the awesome collaborative effort creating our M-CRIB neonatal brain atlases, and thanks to @MCRI_for_kids.
Very sad to hear of the passing of Rahul Desikan, whose work is so inspirational to so many of us. Condolences to all who knew him. radiology.ucsf.edu/blog/rahu…
Bonnie Alexander retweeted
Working with neonatal MRI data?
*T106* today for a software demonstration by @DrGiraffeBird of the Surface-based Melbourne Children’s Regional Infant Brain atlas
Freesurfer-compatible parcellation of the neonatal cortex w/@BonnieAlexandr
#OHBM2019
Our new multi-subject neonatal parcellated white matter atlas, the M-CRIB-WM, up on bioRxiv. Some meticulous work by Dr Sarah Yao and colleagues! biorxiv.org/content/10.1101/… #Parcellation #BrainAtlas #Neonates
Bonnie Alexander retweeted
New from the team. @BonnieAlexandr @garedaba
Parcellation of the cortex using Surface-based Melbourne Children's Regional Infant Brain atlases (M-CRIB-S) | #bioRxiv biorxiv.org/content/10.1101/…
Our new M-CRIB 2.0 neonatal parcellated brain atlas: frontiersin.org/articles/10.…. Contains cortical regions compatible with the adult DKT cortical protocol, & subcortical regions updated for greater consistency with FreeSurfer’s subcortical segmentation. #Parcellation #BrainAtlas
Had a great first day at Software Carpentry python course today, thanks @alistairwalsh, @peter_goodin, and helpers, for putting it on! Also it was really nice to be at Swinburne again. So many imaging memories, and such good coffee :)
This was such a great workshop, with heaps of valuable practical advice presented. Thanks Tim and #ACNS2018 folks for organising!
Workshop 3 at #ACNS2018 with such a comprehensive overview of Developmental Cognitive Neuroscience! Thank you to Tim Silk, @m_spencersmith Sarah Barton, @silascribbles @BonnieAlexandr Jarrod Lum, Natalia Albien-Urios and all the behind the scenes people!
