@compomics

The CompOmics group specializes in the management, analysis and integration of high-throughput biological data

 Ghent, Belgium
compomics.com
Joined November 2011
  • Tweets750
  • Following197
  • Followers1.3K
55Media
Replying to @RalfGabriels
@RalfGabriels taking the scene to demonstrate the latest & greatest out of the @compomics group - data analytics are sure to take us where we need to be as a field! #iSCMS2024
4
11
565
Replying to @compomics
@Compomics is on its way to Dresden for #HUPO2024! Come say hi at our posters, listen to the sessions or join us at the bioinformatics hub. Looking forward to see you there!
4
1
8
440
Proud to finally have this one out! A great collaborative effort with two of my heroes @1jvaneyk and @CwittieH
jennifer van eyk@1jvaneyk15 Jun 2024
Acoustic ejection mass spectrometry empowers ultra-fast protein biomarker quantification | Nature Communications nature.com/articles/s41467-0…

Acoustic ejection mass spectrometry empowers ultra-fast protein biomarker quantification

Nature Communications - There is an increasing demand for high sample throughput beyond traditional analytical techniques. Here the authors show that Ultra-high throughput assays, based on the...

nature.com
3
11
1,012
Fresh from the @Matrix_Science breakfast seminar at #ASMS2024: MS2Rescore will be integrated into Mascot 2.9. Simply enable it by ticking the checkbox ✅
2
11
545
The cool kids are in the back! Join me today at the bioinformatics hub at #ASMS2024 located on the left side of the poster hall. Let's talk metadata ✌️
4
13
962
Preparing for the 3D print exhibition at #ASMS2024, I think these will look pretty nice!
4
35
1,467
CompOmics retweeted
An Staes@AnStaes26 Apr 2024
Here it is: our paper on the benefit of using in silico predicted libraries in DIA 🎉🎉🎉😎🙏 pubs.acs.org/doi/10.1021/acs… @KrisGevaert_VIB @RalfGabriels @RobbinBouwmees @SaraDuf79861163 @mtpmmaia @VIBProteomxCore @ImpensLab

Benefit of In Silico Predicted Spectral Libraries in Data-Independent Acquisition Data Analysis...

Abstract. Data-independent acquisition (DIA) has become a well-established method for MS-based proteomics. However, the list of options to analyze this typ

pubs.acs.org
1
14
40
2,803
No notes. @pride_ebi 's LLM chatbot does everything I expect it to do
2
16
435
Really excited to see this published! We have worked on this for quite a few years; to see it come together in this paper is very rewarding: sciencedirect.com/science/ar… Definitely give it a read if you are interested in predicting CCS values with ML and molecular dynamics combined.
2
4
29
1,487
Happy to announce MS²Rescore v3.0, our much-improved platform for #MachineLearning-driven rescoring of #Proteomics search results. Read more in our publication or in the thread below. bit.ly/3VjMHOg
2
12
2
40
4,371
The @compomics team is present at the #PSI2024 meeting in Kyoto, Japan. Ready for proteomics standardization! @Pathmanaban_ @tvdbossche – at Kyoto-shi Kamigyo-ku, Kyoto
1
4
31
1,312
Really looking forward to this webinar! Presentation of ProteoBench: community effort to compare MS analysis software tools. (beta version: proteobench.cubimed.rub.de/) Webinar takes place the 27th of February at 6pm CET (register here: shorturl.at/czAQ0)
9
26
1,651
Incredibly excited and proud to announce our latest work in Nature Communications 🎉 We introduce lesSDRF, an innovative tool revolutionizing metadata annotation in proteomics using the SDRF format. 🔗 Check out our article: nature.com/articles/s41467-0… (1/3) #proteomics #metadata

lesSDRF is more: maximizing the value of proteomics data through streamlined metadata annotation

Nature Communications - Public proteomics data often lack essential metadata, limiting their potential. To address this, the authors developed lesSDRF, a tool to simplify the process of metadata...

nature.com
1
13
1
44
4,001
Super happy to announce the new release of @nf_core /mhcquant: A @nextflowio based pipeline to identify and quantify @immunopeptidomics data. We did some major rework towards structure and performance of the pipeline (1/4) github.com/nf-core/mhcquant/…

Release mhcquant 2.5.0 - Angry Bird · nf-core/mhcquant

Added #267 Support for brukers tdf format by adding tdf2mzml converter #269 DeepLC retention time prediction (shout out to @steffenlem) #270 MS2PIP peak intensity prediction (shout out to @steffen...

github.com
1
7
34
2,873
CompOmics retweeted
EuBIC-MS@EuBIC_ms29 Sep 2023
Registration for the #EuBIC2024 Winter School on Computational Mass Spectrometry is now open! 🎉 Don't hesitate to register; the event is limited to 115 participants. Early bird registration closes on 13/11/2023. 📅 All info on eubic-ms.org/events/2024-win…
19
3
24
4,108
Just had a great time presenting at #HUPO2023 about #lesSDRF! If you want to use it, add to it or have some feedback ➡️ lessdrf.streamlit.app @compomics @hupo_org @pride_ebi
4
39
2,628
The @compomics team is present and ready for #HUPO2023
3
33
1,563
One more year it's been a privilege to spend this week with trainers & students! Thanks to @EBItraining and to all the trainers incl. Lennart (@compomics), @lilley_ks, @andy___jones, @lievenClement @maxquant, @pride_ebi & @intact_project teams, @lievenClement, etc. #proteomics
EMBL-EBI Training@EBItraining7 Jul 2023
A huge thank you to all the participants, organisers, and behind-the-scenes staff that joined us this week for our #proteomics #bioinformatics course, run in association with @VIBLifeSciences Sign up for alerts for the next edition of the course: mailchi.mp/ebi/pro24_alerts
A group of people are sitting or standing whilst they smile and wave to the camera. They're outside the EMBL-EBI building. A digital banner above them reads 'Proteomics bioinformatics. EMBL-EBI Course. 3 – 7 July 2023'. VIB and EMBL-EBI logos are also displayed.

ALT A group of people are sitting or standing whilst they smile and wave to the camera. They're outside the EMBL-EBI building. A digital banner above them reads 'Proteomics bioinformatics. EMBL-EBI Course. 3 – 7 July 2023'. VIB and EMBL-EBI logos are also displayed.

6
17
3,067
At #ASMS2023 and interested in Post-translational modifications of proteins? Feel free to join me this afternoon where I will be talking about my recent work on #tissue specific #PTM maps in #human #proteome. Especially on tissue specific protein #phosphorylation.
2
11
699
Come have a look at the special 3D print exhibition of @MagnusPalmblad and me. Many thanks to everyone that submitted 3D models, and even brought them to Houston! #ASMS2023 #ASMS
3
7
53
4,066
Load more