Professor of Computer Science. interests in computational modelling, machine learning, medical imaging, data analysis.

Joined June 2019
Exciting Research fellow position at our department, jointly with Computer Science and the EPSRC CHAI Hub, on causal machine learning research for brain disease progression! Deadline: 30 Aug 2024. Details at ucl.ac.uk/work-at-ucl/search…
1
4
6
1,114
Huge thanks to our coauthors @lasgarba, Nick Fox, @FBarkhof, @jmschott, the paper reviewers, and our many wonderful colleagues working in the field!
2
4
709
D3PMs have provided insights across a range of conditions (Alzheimer’s and beyond) including disease biomarker timescales, quantitative support for hypothetical biomarker trajectories and disease mechanisms, disease subtype discovery, and novel strategies for clinical trials.
1
1
3
600
Pathophysiological D3PMs include network, dynamical systems and mechanistic combinations models. As with phenomenological D3PMs, each provides their own insight and utility.
1
1
2
417
Pathophysiological D3PMs model disease mechanisms that may cause pathology to ‘appear’ or ‘spread’ across the brain.
1
1
2
384
Phenomenological D3PMs include discrete, continuous, spatiotemporal, and subtyping models. Each provides their own unique insight and utility.
1
1
2
323
We provide a single framework for D3PMing that integrates phenomenological and pathophysiological models. D3PMs are directly informed by measured data, but human insight is key to the interpretability of D3PMs, avoiding the black-box nature of many AI systems.
1
1
4
645
D3PMs are an emerging set of interpretable computational tools that infer long-term disease timelines from short-term data. Our review divides D3PMs into phenomenological (higher level disease biomarker models) and pathophysiological (lower level disease mechanism models).
1
1
4
596
Fantastic collaboration to bring this review together!
New paper alert! rdcu.be/dvstu Our review paper on Data-Driven Disease Progression Modelling (D3PM) was published in @NatRevNeurosci yesterday, co-led by myself, @YoungAlexL, & @fishpiechicken at @uclcs and @CmicUcl
8
811
New paper alert! rdcu.be/dvstu Our review paper on Data-Driven Disease Progression Modelling (D3PM) was published in @NatRevNeurosci yesterday, co-led by myself, @YoungAlexL, & @fishpiechicken at @uclcs and @CmicUcl
2
18
2
48
6,411
Daniel Alexander retweeted
Postdoc position available in the @POND_UCL group @CmicUcl developing machine learning tools to identify mixed pathology in dementia as part of my 8-year Wellcome-funded project. Closing date: 17th Dec. Please share: ucl.ac.uk/work-at-ucl/search…
18
24
4,176
Excited and proud to be part of this. Looking forward to the next steps in the @CmicUcl and @UCLeye collaboration and crossover of @UCLHresearch @MoorfieldsBRC BRCs.
Replying to @pearsekeane
7/ Great to co-lead this with @fishpiechicken @CmicUcl @uclcs Shows the potential when world-leading #NHS data can be combined with UK university #AI expertise! Supported by cross @NIHRresearch Biomedical Research Centre input @MoorfieldsBRC @UCLHresearch @BirminghamBRC
3
2
27
2,757
New paper in Imaging Neuroscience @mitpress by @WijDr Peter Wijeratne, @fishpiechicken Daniel Alexander, et al: The temporal event-based model: Learning event timelines in progressive diseases direct.mit.edu/imag/article/…
1
2
15
5,451
Go Tiantian!
Look forward to sharing our work in the Neurodegenerative disorders oral session 16:45-18:00 Sunday July 23 in room 513 or in the poster sessions (ID 1466) at #OHBM2023! @anna_schroder @e_thompson93 @NeilOxtoby Ahmed @FBarkhof @fishpiechicken @medimaging_cdt @CmicUcl @UCLMIGPOND
1
1
5
914
PhD op 2 @CmicUCL @medicalimaging_cdt: Computational modelling of disease progression and subtype discovery in Alzheimer’s disease bit.ly/44b4Mz4 using completely new ways to model disease cohorts via unsupervised learning. Join CU-MONDAI project. Deadline 3rd July.
9
1
21
2,851
PhD op 1 @CmicUCL @medicalimaging_cdt: Reinforcement learning for brain connectivity mapping bit.ly/46qDw1N . Revolutionise and optimise tractography for modelling and understanding Alzheimer’s disease. Join CU-MONDAI project. Deadline 3rd July.
10
30
4,354
PhDs in machine learning, imaging, disease modelling within CU-MONDAI project @CmicUCL collaborating with @drcionucl. 1. bit.ly/46qDw1N . 2. bit.ly/44b4Mz4 . Wellcome Trust stipend +fees for home students. Join i4health CDT @medicalimaging_cdt. DL 3rd July.
2
2
5
1,011
Exciting opportunity to work with us at @CmicUcl and @rebeccajshipley and team developing MRI-based models to help minimise pregnancy complications.
UCL-CMIC is offering a full-time role as a Research Fellow in Machine Learning & Modelling in Placental MRI For info/apply, follow the link Closing date is 18th June 2023; interviews 30th June. Job details: ucl.ac.uk/work-at-ucl/redepl…
6
9
1,302