Renesh Bedre (@renbedre) profile picture

Renesh Bedre

@renbedre

Genomics, Bioinformatics, Gene Networks, Biostatistics, Python, R

 Texas, USA
reneshbedre.com/
Joined March 2018
  • Tweets75
  • Following123
  • Followers158
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Photo by Renesh Bedre (@renbedre)Photo by Renesh Bedre (@renbedre)
Terrific work by @ArangRhie, @aphillippy, and a large supporting case to assemble and annotate the first truly complete human Y chromosome. (This Y sequence is already in the #T2T complete human genome; this new paper gives all the details) biorxiv.org/content/10.1101/…
The complete sequence of a human Y chromosome

The complete sequence of a human Y chromosome

The human Y chromosome has been notoriously difficult to sequence and assemble because of its complex repeat structure including long palindromes, tandem repeats, and segmental duplications. As a...

biorxiv.org
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Renesh Bedre retweeted
nf-core (@nf_core) profile picture
nf-core@nf_core28 Nov 2022
The applications for the second round of the @nextflowio / @nf_core #bioinformatics #mentorships program, funded by @cziscience, are in! More info 👉 nf-co.re/mentorships The response we had was amazing again! Below is a quick thread about the applications! 🥳
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Please RT and encourage your students and desirees to apply for graduate school. I am looking for PhD/MS graduate students interested to work on plant phenotyping, data science, genomics. Reach out to me & apply at bpp.oregonstate.edu/bpp/acad… @osubpp @plantae_org Greenhouse view
Image from Pankaj Jaiswal (@pjaiswal37)
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Memories
Sally Mallowa (@smallowa) profile pictureSally Mallowa@smallowa8 Aug 2017
Flat de Bary with Renesh Bedre receiving his Gift Certificate for the PPB Drawing ! # Engage your representative #APS2017 @plantdisease
Image from Sally Mallowa (@smallowa)
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Renesh Bedre retweeted
Professor (@intelsoftIN) profile picture
Professor
@intelsoftIN4 Jul 2022
A 30 seconds chronicle of life. In fact we are less than 30 seconds in entire human existence
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#ouch
Image from Jason H. Moore, PhD (@moorejh)
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Assistant Research Scientist position is open for Bioinformatics and Genomics research in plants at Texas A&M AgriLife Research. Apply here lnkd.in/gD_BgaJX

LinkedIn

This link will take you to a page that’s not on LinkedIn

lnkd.in
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Renesh Bedre retweeted
Phytozome (@phytozome) profile picture
Phytozome@phytozome11 Jun 2022
Explore plant polyploidy with the new GENESPACE multi-scale synteny viewer on Phytozome. Go to phytozome.jgi.doe.gov/synten… or choose Synteny from the Phytozome Tools menu. @jgi @hudsonalpha @_johntlovell
Image from Phytozome (@phytozome)
Image from Phytozome (@phytozome)
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I am excited to share that I have started a new position as Bioinformatics Scientist at Thermo Fisher Scientific!!
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Evan Floden (@EvanFloden) profile picture
Evan Floden
@EvanFloden29 Mar 2022
DSL2 set become the default. Time to update our workshop materials 🏗️
Nextflow (@nextflowio) profile pictureNextflow@nextflowio24 Mar 2022
New blog post: Evolution of the Nextflow runtime ✨✨ nextflow.io/blog/2022/evolut…
Evolution of the Nextflow runtime | Seqera

Evolution of the Nextflow runtime | Seqera

Software development is a constantly evolving process that requires continuous adaptation to keep pace with new technologies, user needs, and trends. Likewise, changes are needed in order to introd...

seqera.io
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#coding #lol
Image from Jason H. Moore, PhD (@moorejh)
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Renesh Bedre retweeted
Phytozome (@phytozome) profile picture
Phytozome@phytozome2 Mar 2022
From a collaboration involving @jgi, @hudsonalpha, @CottonInc, @CSIRO, @CropSoilUGA, and @UArkansas, the genomes of three additional upland cotton cultivars (CSX8308, UA48, and UGA230) are now available at phytozome-next.jgi.doe.gov.
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There is a bioinformatics leadership position open at NIH: Director, National Center for Biotechnology Information (NCBI) & NLM Associate Director for Scientific Data Resources nlm.nih.gov/careers/NCBI_Dir… #bioinformatics
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The Nextflow community is growing! Today we are introducing a new Slack channel for community discussions! Check it out 🚀🚀nextflow.io/blog/2022/nextfl…

Nextflow’s community is moving to Slack! | Seqera

The Nextflow community channel on Gitter has grown substantially over the last few years and today has more than 1,300 members.

seqera.io
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Renesh Bedre retweeted
ASPB (@ASPB) profile picture
ASPB
@ASPB7 Feb 2022
The deadline has been extended. Don't miss this opportunity for a travel award to Plant Biology 2022! buff.ly/2Rn30oY
Image from ASPB (@ASPB)
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Our paper exploring the vitamin C content in spinach is published. A global panel of 352 spinach accessions was analyzed to identify SNPs (GBS) followed by marker-trait association by GWAS. This study helped to identify spinach with high vitamin C content. frontiersin.org/articles/10.…
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Renesh Bedre retweeted
Andrew Severin (@isugif) profile picture
Andrew Severin@isugif10 Jan 2022
We have funding for a USDA ORISE postdoc. zintellect.com/Opportunity/D… Advance scientific discovery at the USDA with lots of opportunity for learning, writing papers and high pay. Currently open to all US citizens. #AI #alphafold #genomeassembly #annotation #biology #geospatial
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Due to the rising number of COVID-19 cases and importance of maintaining a safe and healthy environment for all attending, we have made the difficult decision to cancel #PAGXXIX. Emails to all registered attendees are forthcoming. Thank you for your support and understanding.
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Evan Floden (@EvanFloden) profile picture
Evan Floden
@EvanFloden16 Dec 2021
Santa arrived early this year! The Nextflow ecosystem gets richer with an awesome new command-line tool for Tower to manage and deploy your pipelines from a shell terminal! bit.ly/31W21rd
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If you are interested in running Nextflow pipelines on Azure, you might want to join us here. @katatonikkat @aka_hpatel @jermth @ManueleSimi
Seqera (@SeqeraLabs) profile pictureSeqera
@SeqeraLabs6 Dec 2021
Join us next Monday the 13th at 11 am ET for a 3h Micro-hack! We are hosting the Azure team and will be learning how to run Nextflow pipelines on Azure Batch with Tower. bit.ly/3drcmxa
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