Bartolini Lab retweeted
Looking for a faculty position combining research in fundamental cell and molecular biology with therapeutic discovery?
Join our amazing faculty at the @weillinstitute at @Cornell University in Ithaca, New York.
academicjobsonline.org/ajo/j…
Apply by Nov. 15!
Please share!
Bartolini Lab retweeted
at isab.science we are starting with 2 independent PIs and a smaller lab for me. We have space + resources for a 4th lab working on cellular/molecular/immunological aspects of neurodegeneration. Interested? I'll discuss your application with our SAB (see below)!
Bartolini Lab retweeted
🚨 Want to start your lab in Marseille on a broad neuronal/brain development theme? There's an exciting tenure track opportunity at @inp_marseille and others Marseille institutes! Check more details here: neuro-marseille.org/en/blog/… or contact me if you have any question
Bartolini Lab retweeted
Cell biologist Mark Terasaki will give US$25 million of his own money to preserve the legacy of a pioneering scientific institute in Woods Hole, Massachusetts. go.nature.com/428hX53
Bartolini Lab retweeted
A new mechanism for “RNA memory”! 😱
Thrilled to share another crazy paper from the lab (can’t believe we posted 2 in 2 days!), summarizing >10 years of research:
Work on transgenerational inheritance of small RNAs in the powerful model organism C. elegans changed how we think about what’s possible in inheritance and evolution, because it allows the most heretical thing: inheritance of parental responses to the environment! However, it’s still unclear whether RNAs are inherited across generations in other animals, largely because the RNA-dependent RNA polymerases that amplify heritable small RNAs and prevent their dilution in C. elegans are not conserved in mammals.
In this new work, an amazing collaboration with the Rink and Wurtzel labs, we show that planarians establish long-lasting and heritable small RNA–based gene regulatory states despite lacking canonical RNA-dependent RNA polymerases and nuclear RNAi machinery (that are required in C. elegans).
You might say “they are both worms…” BUT planarians are evolutionarily very distant from C. elegans (flatworms vs. roundworms, diverged more than 500 million years ago), making this particularly surprising. These are totally different animals.
We find that ingestion of double-stranded RNA induces sequence-specific silencing that persists for months and survives repeated cycles of whole-body regeneration. Even more strikingly, RNAi can be transferred between animals, echoing James V. McConnell’s controversial “RNA memory” experiments from the 1970s (his lab was targeted by the Unabomber terrorist Ted Kaczynski, who sent McConnell a bomb. This and other controversies ended this line of experiments…)
Mechanistically, we find that the response transitions from a transient systemic dsRNA-triggered phase to a stable, cell-autonomous post-transcriptional “memory phase” maintained by antisense small RNAs. Using a new luminescence reporter (transgenesis is currently impossible in planarians), we show that silencing spreads along the targeted gene and identify a weird type of planarian small RNAs with untemplated polyA tails.
RNAi inheritance without canonical RdRPs establishes planarians as a powerful system for studying RNA-based regulatory inheritance beyond C. elegans and raises the possibility that RNA-mediated inheritance may be more broadly conserved in animals, potentially even in mammals.
Here’s a video of a planarian that is treated by RNAi against β-catenin and develops multiple heads instead of just one. This is one of the phenotypes that is inherited. Another phenotype is “loss of eyes” (which we show is not only inherited across multiple regeneration cycles, but can also be transmitted between animals in transplantation experiments).
Amazing work led by first authors Prakash Cherian and Idit Aviram (co-supervised by Omri and me).
Please read the preprint, the link is in the next tweet, and share!
Bartolini Lab retweeted
No-cost workshop opportunities for grad students, postdocs, & trainees! Our Janelia Research Campus is accepting apps for 3 specialized, intensive workshops w/ presentation & networking opportunities. Accommodations, meals, & travel expenses covered: bit.ly/4roghP6.
New @CellCellPress paper from Bergles lab at Johns Hopkins just built the most comprehensive map of brain myelin ever made — every oligodendrocyte, across the entire mouse brain, across the lifespan.
The scale: >10 million cells per brain, terabyte-scale 3D lightsheet volumes, registered to the Allen Brain Atlas across 417 regions from 2 months to 2+ years of age.
The technical stack:
Custom tissue clearing (CUBIC-L + SHIELD + uRIMS with 40% urea) to preserve endogenous fluorescence. 3D Mask R-CNN for instance segmentation — not just semantic, instance — so it can distinguish individual cells within dense clusters at scale via overlapping sliding windows. Vision Transformer to classify newly-formed vs. mature oligodendrocytes using soma morphology. All cross-referenced against Allen ISH
transcriptomics and MICrONS serial EM.
What they found:
Oligodendrocyte density varies 10,000-fold across brain regions. Left-right hemispheres: r=0.99. Sex: no significant difference. Strain: matters.
The brain never stops myelinating. New oligodendrocytes are still being generated in 2-year-old mice. Prefrontal cortex L6 shows the fastest rates of new myelination into old age — the circuits for executive
function keep rewiring throughout life.
After demyelination, L4 sensory cortex is the most resilient — oligodendrocytes survive at higher rates. The hippocampus loses nearly everything and barely recovers. Degree of injury doesn't predict rate of
recovery. These are independent axes.
The Alzheimer's result is the most surprising:
Dense-core plaques dominate in cortex and hippocampus. Diffuse/small-core plaques dominate in white matter fiber tracts. Old assumption: diffuse plaques are "less toxic." The data says the opposite — small plaques in fiber tracts cause more myelin loss per plaque than dense-core plaques in gray matter. Plaque load and oligodendrocyte loss are essentially uncorrelated (ρ=0.22). The damage is plaque-type and location specific, not load-dependent.
For MS and AD research: you can't read off white matter injury from gray matter plaque burden. The pathology in fiber tracts is running on different rules.
Data: bossdb.org/project/xu2024
Paper: cell.com/cell/fulltext/S0092…
Bartolini Lab retweeted
279 postdoctoral fellowships!
Download freely our database of postdoctoral fellowships and grants. For each entry, we provide eligibility criteria, $ amount, deadline, etc.
We also provide separate databases for oncology and neuroX.
Good luck!
Here: research.jhu.edu/rdt/funding…
Bartolini Lab retweeted
Pain-sensing neurons in the intestines play an important role in defending the body from threats.
New study led by the Artis Lab at @WeillCornell shows TRPV1+ nociceptors in the gut activate tuft cells, leading to expulsion of parasites.
🔗 nature.com/articles/s41586-0…
Bartolini Lab retweeted
Today in @Nature we report a new prime editing strategy that can rescue a common cause of many genetic diseases in a disease-agnostic manner. This approach converts a redundant endogenous tRNA into an optimized suppressor tRNA, enabling a single prime edit to rescue premature stop codons across different diseases.
(1/15)
drive.google.com/file/d/1bSv…
Bartolini Lab retweeted
Deadline Dec 5. Fellowships: Pancreatic Cancer Detection/AI—& more.
Scadenza: 5 dicembre. Borse di ricerca sul Cancro al pancreas/intelligenza artificiale—e molto altro.
@Columbia. Details: tinyurl.com/iafellow26 #WorldPancreaticCancerDay
#PancreaticCancerAwarenessMonth
Bartolini Lab retweeted
Great opportunity for early career faculty!
A terrific new opportunity for new or early career faculty to join the outstanding and rapidly growing faculty of @UTSWBrain. Spread the word!
Bartolini Lab retweeted
BREAKING NEWS
The 2025 #NobelPrize in Physiology or Medicine has been awarded to Mary E. Brunkow, Fred Ramsdell and Shimon Sakaguchi “for their discoveries concerning peripheral immune tolerance.”
Bartolini Lab retweeted
“I believe this will encourage immunologists and physicians to apply T regulatory cells to treat various immunological diseases.”
This year’s Nobel Prize laureate, Shimon Sakaguchi, discovered a new class of T cells that protect the body from autoimmune diseases.
Just after the prize announcement we spoke to him about the fundamental research question that kept him dedicated to the field long after many others gave up.
Listen to our interview with the happy and surprised laureate:
#NobelPrize
Bartolini Lab retweeted
Reconstructing long-range axons from dense brain images is tough.
This study introduces a novel method that separates axon identification from global statistical rules, showing big improvements over existing tools for mapping neuronal projections.
elifesciences.org/articles/1…
Bartolini Lab retweeted
Proximity-specific ribosome profiling using LOV-BirA reveals two distinct strategies for mitochondrially-localized translation: one for long coding sequences and one for short. It was a pleasure to contribute to this beautiful work from Jonathan Weissman @JswLab and @JingchuanLuo
LOV-BirA, light regulated biotin ligase, engineered by Song-Yi Lee
sciencedirect.com/science/ar…
Bartolini Lab retweeted
When it comes to aging, the health of even the smallest vessels is critical to maintaining cognitive function.
New study in @Nature finds that deterioration of the brain's drainage system contributes to reduced blood supply in deep white matter: nature.com/articles/s41593-0…
Bartolini Lab retweeted
MOSAIC large field of view 3D single molecule localization microscopy of mitochondrial outer membranes and nuclear membranes in fixed U2OS cells.
Bartolini Lab retweeted
Nature research paper: Lithium deficiency and the onset of Alzheimer’s disease
go.nature.com/4mwBvbr
Bartolini Lab retweeted
If you're tired of AI and stuff...we published CRISPR-based protocols that you can actually use to delete alpha-synuclein (~100% efficiency) or knock it into endogenous locus (~53% eff) in cultured neurons: star-protocols.cell.com/prot…

































