BioCyc: microbial-genome web portal with predicted metabolic pathways and omics analysis tools. Pathway Tools: metabolic reconstruction and modeling software.

Joined June 2012
BioCyc&Pathway Tools retweeted
Replying to @bradyajohnston
This is really awesome! And, the authors used BioCyc as one of the databases to cross reference - go @biocyc with more than 200 genomes for Mycoplasma!
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BioCyc&Pathway Tools retweeted
Come check out my @BioCyc eposter (#323) at @AUSSOCMIC #2021ASM meeting! And sign up for our free tutorial for next 9th June at sri.zoomgov.com/meeting/regi…
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BioCyc&Pathway Tools retweeted
Thank you @MarioFeldman9 & the organising team for the #acinetovibes conference! I had a great time learning more about #Acinetobacter & meeting all the awesome AcB researchers in Gather Town, which was super cool! Thanks to @BioCyc for sponsoring the poster event @Lisa_R_Moore
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BioCyc&Pathway Tools retweeted
Replying to @BioCyc
@BioCyc was a proud sponsor of #AcinetoVibes! Don't forget to register (tinyurl.com/2ck96h4r) for the BioCyc tutorial next week (11 May, 4:30pm US Pacific time, or 12 May, 9:30am Aus Sydney time) to learn more about using the awesome Omics analysis tools!
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BioCyc&Pathway Tools retweeted
Looking forward to next weeks #JAMS join @CuriousMolecule and @Lisa_R_Moore to talk in person about their amazing projects. #Acinetobacter #AMR #ESKAPE @BioCyc #genomes #pathways it will be a multimodal event! Come to Harpoon Harry or Zoom in online macquarie.zoom.us/j/85270862…
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Shout out also to Monica Riley, who did more to annotate the E. coli genome than you probably know, and was instrumental in the founding of Ecocyc.org @biocyc
You probably know what Rosalind Franklin did for science. But you should know these pioneers too. In honor of #InternationalWomensDay, meet three overlooked scientists who blazed trails for modern synthetic biology 👩‍🔬ow.ly/yUee50DTdbA #IWD2021 #WomensHistoryMonth
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And if you are not using BioCyc and are doing synbio or systems biology, you probably should be.
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BioCyc&Pathway Tools retweeted
Amazing! A big thank you to the Bioinformatics Research Group at @SRI_Intl, and especially to Dr. Ingrid Keseler for the update to BsubCyc!
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BioCyc&Pathway Tools retweeted
Thank you @BioCyc for your generous support of BLAST XVI!
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BioCyc&Pathway Tools retweeted
This is a more atom-resolved approach compared to the work that me, @mtraven , @pkarp222 , Anamika Kothari, and Ron Caspi did before to link MetaCyc and KEGG compounds: bmcbioinformatics.biomedcent…
New method for finding compound correspondences between MetaCyc and KEGG.
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BioCyc&Pathway Tools retweeted
With growing evidence that carbon utilization is an Achilles heel for many pathogens, @maddytong led a genome-scale look at the growth of E. coli in 30 carbon sources. Shout out to the Karp Lab and the new metabolic modelling capabilities of @BioCyc.
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BioCyc&Pathway Tools retweeted
Have you entered our sourdough 🍞🥖 competition yet, there is still time! Read all about the sourdough microbiome from @ASMicrobiology to tie in with #WorldMicrobiomeDay asm.org/Articles/2020/June/T…
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BioCyc&Pathway Tools retweeted
New research reveals the first hints of a simple, seemingly universal set of rules that define the robustness of natural light harvesters, which could inform the design of future solar technology. Learn more: ($) fcld.ly/6t59k2m #SciMagPerspective #Photosynthesis
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BioCyc&Pathway Tools retweeted
A review on Metabolic Engineering Strategies for Butanol Production in Escherichia Coli was recently published with contributions from @SilicoLife - congratulations to all the authors! We keep contributing to further develop biobutanol pubmed.ncbi.nlm.nih.gov/3237… #butanol #biotech
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BioCyc&Pathway Tools retweeted
Our minireview has been officially published. So cool to be part of this collection of reviews written by early-career microbiologists (like @joeyzacks @DavisLabJHU @CassatLab and others) published today on @ASMicrobiology Infection and Immunity. iai.asm.org/content/88/7/e00…
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BioCyc&Pathway Tools retweeted
It's World #Microbiome Day! The unique characteristics of #sourdough #bread result from the #microbes in the starter, but what do we know about sourdough starter microbiomes? Read our latest article by @justineldees: skyw.io/KBvZeD #yeast #bacteria #WMicrobiomeDay2020
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BioCyc&Pathway Tools retweeted
Cerium, Neodymium, Praseodymium... Heavy rare earth elements known as lanthanide metals are now found to be essential to the biochemistry of certain bacteria and deep sea animals. @Dereklowe: blogs.sciencemag.org/pipelin…
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BioCyc&Pathway Tools retweeted
I am using this resource & figured I would share w/ others since I remember an UG using PathwayTools in @kristenobacter lab for my project & WOW do I wish we had these videos back then! #Bioinformatics #sciencetwitter #phdchat #postdoc #biology youtu.be/_NKWZjDvQBM
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