@CQLSOregonState

Center for Quantitative Life Sciences #Bioinformatics #Genomics #Biocomputing #Laboratory services

 Corvallis, OR
cqls.oregonstate.edu/
Joined September 2018
  • Tweets268
  • Following99
  • Followers233
85Media
Are you a graduate student or postdoc working with quantitative data? Join us to learn foundational data science skills in a collaborative setting. Workshops start March 29, open to UO, OSU and PSU communities. Details and registration: odsc.cqls.oregonstate.edu/Wo… @CQLSOregonState
8
1
10
CQLS Oregon State retweeted
Posy Busby@posybusby10 Mar 2022
Job alert! Interested in fungal ecology, phyllosphere microbiome assembly, plant disease? The Busby lab at Oregon State University is searching for a postdoc to contribute to a new NSF CAREER project. gradschool.oregonstate.edu/p…
3
144
3
172
CQLS Oregon State retweeted
Thomas Sharpton@tjsharpton18 Feb 2022
Looking for an undergraduate summer research internship? The Department of Environmental and Molecular Toxicology at @OSUAgSci is accepting applications. emt.oregonstate.edu/emt/unde…

Fang Introduction to Toxicology Undergraduate Summer Internships

emt.oregonstate.edu
1
4
6
CQLS Oregon State retweeted
Molly Burke@mollykburke16 Feb 2022
New paper with grad student Katie McHugh (not on Twitter) out in Evolution! I’d like to think we made pandemic lemonade with this piece. While the lab was closed, we hit the books, and our future experiments will be better for it. bit.ly/3HQeBrz
1
3
1
7
CQLS Oregon State retweeted
Thomas Sharpton@tjsharpton28 Jan 2022
Thank you @AMD for donating to the @CQLSOregonState a MI100 32g GPGPU for the Sharpton lab's research on the gut microbiome's role in mediating toxicity! Shown here is one of our enterprising trainees who is excited to put this resource to good use!
1
1
20
CQLS Oregon State retweeted
Thomas Sharpton@tjsharpton24 Jan 2022
Some days, the universe reminds you how amazing other people and organizations can be! Thanks @AMD for donating two 7763 processors through the @CQLSOregonState for the Sharpton lab's research to define how gut microbes mediate the effect of pollutants on health and behavior!
1
1
15
CQLS Oregon State retweeted
Amy Bohnert@Amy_Bohnert21 Dec 2021
New paper from the VA COVID-19 Observational Research Collaboratory! Supported by @VAResearch @vahsrd, with @gnioannou @annmohare @dhynes1010 and others
Annals of Int Med
@AnnalsofIM21 Dec 2021
A target trial emulation study from @gnioannou @UWMedicine found that #mRNA vaccines were less effective at preventing infection, but very effective at preventing death from #COVID19: acpjournals.org/doi/10.7326/…
3
4
5
CQLS Oregon State retweeted
Alex Sathler@alex_sathler17 Sep 2021
Incredible talk about genetic oscillators and toggle switches by @biodesign_lab at the #CQLSFallConf2021. Thank you, Matthew Bennett!
1
5
🥇 ‼️ JADE IS GOLDEN ‼️ @jadeacarey takes the gold medal as the Olympic Champion in the floor exercise! #GoBeavs #TokyoOlympics
21
242
42
2,068
CQLS Oregon State retweeted
Moritz S Schmid@schmidscience13 May 2021
Code is streamlined to set up the pipeline on your local #HPC as well as @NSF's @XSEDEscience. We provide a training library and test data. This is possible through a great collaboration with @CGRBOregonState. @OregonState @ResearchOSU @MSI_OregonState @OSUScience
2
1
3
CQLS Oregon State retweeted
Nextstrain@nextstrain22 Feb 2021
Replying to @nextstrain @GISAID @KEMRI_Wellcome @KEMRI_Kenya @SAHealth @rivm @FiocruzAmazonia @INSColombia @PasteurCambodia @HKUniversity @icmr_niv @usjp @chandi2012 @GMalavige @q_nationaltaiwa @JessaZiekenhuis @IREC_UCLouvain @GIGA_ULiege @MedMicroLab_UA @aausund @institutpasteur @UniklinikDUS @HHU_de @LRMC_Landstuhl @univUda @INMISpallanzani @ATS_Sardegna
USA seqs also thanks to @HealthyFla @MiGScenter @LSUHS @LSUHSEVTLab @MDHealthDept @mnhealth NCSLPH @NDDOH @NMDOH @CGRBOregonState @UtahDepOfHealth @Dr_KFO @erinYoun @microbemagic1 @KATarinambraun @GageKMoreno @tcflab @dho_lab Wyoming PHL @HealthySCC @Ginkgo @pavitrarc 13/13
2
7
CQLS Oregon State retweeted
Nextstrain@nextstrain16 Feb 2021
Replying to @nextstrain @GISAID @Unesp_Oficial @imtspusp @institutpasteur @egonozer @NorthwesternMed @virology_chitra @UGMYogyakarta @btkljogja @chosun_univ @usjp @chandi2012 @GMalavige @JessaZiekenhuis @GIGA_ULiege @MedMicroLab_UA @KU_Leuven @IGAItaly @helsinkiuni @TimoSmura @cerbaresearch @nvrlucdireland @HUCA_Asturias @IBV_CSIC @CEIMIHGUGM @FOIresearch @TanjaStadler_CH @ETH @ETH_BSSE @CovidGenomicsUK @INSPQ @SaM_bioinfo @inmegen @InstitutoGorgas @JeanCarrPaul @SandraLpezVergs @DaniloePanama
You can find the new sequences from the USA (578) below. (Thanks to @HealthySCC @delaware_gov @KDHE @LauringLab NYC Pandemic Response Lab @OSUWexMed @CGRBOregonState @bjdsop @KATarinambraun @GageKMoreno @tcflab @dho_lab) 9/9
5
11
CQLS Oregon State retweeted
Oregon Sea Grant@OregonSeaGrant11 Feb 2021
Pacific albacore intermingle across the equator & sometimes breed with each other, but they remain separate stocks, says an OSU study. Albacore in the North & South Pacific Oceans are currently managed as separate stocks. The study affirms this approach. beav.es/Jsr
A person holds an albacore tuna.

ALT A person holds an albacore tuna.

4
1
10
CQLS Oregon State retweeted
Nextstrain@nextstrain2 Feb 2021
Replying to @nextstrain @GISAID @ccmb_csir @uobasrahedu @INSColombia @Uniandes @az_delta @IREC_UCLouvain @KU_Leuven @AleaCenter @institutpasteur @Universite_Caen @ChariteBerlin @nvrlucdireland @istsupsan @AOUCareggi @LNS_Lux @IMMiTGdynia @rabalski @IBV_CSIC @UniSpitalBasel @AppliedMicrobi2 @tim_roloff @Ulf90 @TheBelsian @sagliklicozum @CovidGenomicsUK @GovCanHealth @CDCgov @InstitutoGorgas @JeanCarrPaul
You can see the new sequences from the USA (667) below. (Thanks to @CDCgov @QuestDX @HealthyFla @LillyPad @jacksonlab @r_tewhey @LauringLab @mnhealth @NMDOH @OHdeptofhealth @CGRBOregonState @HoustonTX @UW @UWMedicine @seattleflustudy @MHealthFairview) 8/8
5
6
CQLS Oregon State retweeted
Oregon State Science@OSUScience26 Jan 2021
Oregon State's TRACE Community COVID-19 project will measure the prevalence of the virus in Redmond. bit.ly/3iOjPbs
2
3
There's still time to register for our annual conference Genomics in Action (genomics.uoregon.edu/). The virtual conference will start one week from today! We hope to see you there! See the schedule at genomics.uoregon.edu/schedul…
4
5
I am pleased to announce that I have published an #OpenEducationalResource called "Applied Bioinformatics". This is intended to introduce students of the life sciences to #bioinformatics. @OpenOregonState open.oregonstate.education/a…

Applied Bioinformatics

The current edition of the book may be downloaded from the Applied Bioinformatics site. Data dashboardAdoption Form

open.oregonstate.education
8
18
CQLS Oregon State retweeted
Botany & Plant Pathology@osubpp3 Dec 2020
Final BPP seminar of the term, don't miss it! Today at 4pm, check your OSU inbox for Zoom details!
1
2
3
I'm starting a youtube channel, here is my first video! Introducing Basic Data Types in Python youtu.be/2lH4uxHCeJA via @YouTube

Introducing Basic Data Types in Python

This video is a brief introduction to the basic data types in pytho...

youtube.com
1
5
29
CQLS Oregon State retweeted
Botany & Plant Pathology@osubpp19 Nov 2020
Coming up at 4pm, don't miss this exciting talk! osubpp.com/anna-lisa-paul/
2
1
Load more