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GarberLab

@GarberLab
 Massachusetts, USA
umassmed.edu/garberlab
Joined April 2018
  • Tweets49
  • Following88
  • Followers235
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Photo by GarberLab (@GarberLab)Photo by GarberLab (@GarberLab)Photo by GarberLab (@GarberLab)Photo by GarberLab (@GarberLab)Photo by GarberLab (@GarberLab)Photo by GarberLab (@GarberLab)Photo by GarberLab (@GarberLab)Photo by GarberLab (@GarberLab)Photo by GarberLab (@GarberLab)
Here is our attempt to assign enhancers to target genes using 3D genomic interactions and there by predict the role of enhancers in regulating gene expression cell.com/molecular-cell/full… @GarberLab @UmassMedbioinfo @garber_manuel
High-Resolution Mapping of Multiway Enhancer-Promoter Interactions Regulating Pathogen Detection

High-Resolution Mapping of Multiway Enhancer-Promoter Interactions Regulating Pathogen Detection

Vangala et al. built a framework to quantify enhancer function by using SPRITE to define complex regulatory interactions at a single-molecule resolution. SPRITE-defined interactions vastly improve...

cell.com
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Replying to @UMassChanGSBS
@GSBS_UMassMed class speaker Pranitha Vangala shares what it's like graduating during a pandemic. Watch @pranithakrishna's story here: bit.ly/2AaMfuj #UMassMedical20 #commencement
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Our recent survey about challenges in data analysis facilities / bioinformatics cores ncbi.nlm.nih.gov/pmc/article…
Bioinformatics Core Survey Highlights the Challenges Facing Data Analysis Facilities

Bioinformatics Core Survey Highlights the Challenges Facing Data Analysis Facilities

Over the last decade, the cost of -omics data creation has decreased 10-fold, whereas the need for analytical support for those data has increased exponentially. Consequently, bioinformaticians face...

pmc.ncbi.nlm.nih.gov
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Yuming Cao from @GarberLab shows that single cell sequencing in influenza infection yields a gold mine of data and is definitely nothing to sneeze at!!! @GSBS_UMassMed @UMassMedical
Image from Jeremy Luban 🧬🦠🔬🩺🎸🎻 (@LubanLab)
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GarberLab retweeted
Elisa (@elisadonnard) profile picture
Elisa@elisadonnard26 Jan 2020
Happy to see this out! Great collab with @vera_rinaldi and @ollie_rando
bioRxiv (@biorxivpreprint) profile picturebioRxiv@biorxivpreprint25 Jan 2020
An atlas of cell types in the mammalian epididymis and vas deferens biorxiv.org/cgi/content/shor… #bioRxiv
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Program in Bioinformatics at UMassMed @UmassMedbioinfo is hiring! We are part of a vibrant and collaborative research community. Feel free to contact our current faculty @garber_manuel @ZhipingWeng @eenork @athmapai or apply online at academicjobsonline.org/ajo/j…
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Brilliant ⁦@GSBS_UMassMed⁩ graduate student Jake Gellatly from ⁦@GarberLab⁩ ⁦@UMassMedical⁩ doing single cell assessment of human autoimmune pathology
Image from Jeremy Luban 🧬🦠🔬🩺🎸🎻 (@LubanLab)
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We are very excited to share our manuscript lead by @meravcohen8 @AmirGiladi and Anna Dorothea Gorki - fun collaboration with the @SylviaKnapp_Lab - Lung single cell signaling interaction map reveals basophil role in macrophage imprinting @CellCellPress cell.com/cell/fulltext/S0092…
Image from IdoAmitLab (@IdoAmitLab)
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Replying to @pranithakrishna
@pranithakrishna from @GarberLab showing everyone how to SIP SPRITE, setting the record straight about enhancers and promoters @GSBS_UMassMed @UMassMedical
Image from Jeremy Luban 🧬🦠🔬🩺🎸🎻 (@LubanLab)
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Replying to @pranithakrishna
@pranithakrishna from @GarberLab gives a #SPRITE-ly talk regarding identification of #TranscriptionalEnhancers @GSBS_UMassMed @UMassMedical
Image from Jeremy Luban 🧬🦠🔬🩺🎸🎻 (@LubanLab)
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Emma Farley: Great talk on syntax of enhancer binding sites. Sub-optimiztion guides tissue specificity. #BOG18
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