Frank Paul Mora retweeted
Histone Modifications at the Intersection of Aging, Neuroinflammation and Metabolism in Alzheimer's Disease
onlinelibrary.wiley.com/doi/…
Frank Paul Mora retweeted
🧬🩸 What if vascular aging is driven not only by inflammation, but also by a fundamental rewiring of how endothelial cells sense mechanical forces?
A new study in Nature Aging introduces the Human Aging Endothelial Cell Atlas (HAECA), revealing conserved and tissue-specific molecular programs of endothelial aging across the adult human lifespan.
The central discovery: Aging endothelial cells exhibit increased inflammatory and senescence-associated signaling, reduced angiogenic programs, altered extracellular matrix remodeling, and enhanced YAP/TAZ-associated mechanotransduction.
🔬 1. Building a comprehensive human endothelial aging atlas
Researchers integrated:
• 375,829 endothelial cells
• 290 human samples
• 12 tissues
• 34 independent transcriptomic studies
The atlas includes endothelial cells from adipose tissue, brain, breast, heart, intestine, kidney, liver, lung, skeletal muscle, ovary, skin, and uterus.
Using integrated scRNA-seq and snRNA-seq data, researchers identified conserved endothelial subtypes along the vascular tree:
Arterial → Capillary → Venous
They also characterized angiogenic and lymphatic endothelial populations.
Importantly, the atlas was constructed from healthy or nondiseased tissues, providing a reference for physiological vascular aging.
🧬 2. A conserved transcriptional signature of endothelial aging
Across tissues, aged endothelial cells exhibited:
Inflammatory signaling ↑
• TNF-associated pathways
• Immune activation
• Senescence-associated secretory phenotype (SASP)
Angiogenic programs ↓
• APLNR
• COL4A1
• ID3
• PLVAP
Mitochondrial and proliferative programs ↓
• Oxidative phosphorylation (OXPHOS)
• MYC target signatures
• Endothelial proliferation
Independent age-stratification analyses identified 287 age-enriched and 135 age-depleted genes with concordant patterns.
These findings support a reproducible transcriptional program of human endothelial aging.
⚡ 3. Venous endothelial cells exhibit pronounced angiogenic decline
One particularly interesting finding was that aging-associated changes differed across vascular compartments.
Arterial endothelial cells:
Increased coagulation- and immune-associated signatures.
Capillary endothelial cells:
Altered stress-response, inflammatory, and metabolic programs.
Venous endothelial cells:
Reduced angiogenesis-associated gene expression, alongside changes in extracellular matrix interactions and cytoskeletal organization.
Because venous endothelial cells can contribute to angiogenic sprouting, their age-associated transcriptional changes may help explain impaired vascular regeneration.
However, the study did not directly establish that these changes cause reduced angiogenesis.
🔥 4. Aging rewires the endothelial extracellular matrix
Researchers identified widespread age-associated changes in genes regulating:
• Extracellular matrix assembly
• Cell adhesion
• Basement membrane organization
• Glycosylation
• Glycocalyx-associated processes
These alterations were particularly prominent in endothelial cells from the liver, lung, skin, and adipose tissue.
Increased expression of several GALNT-family genes and sialyltransferases suggests remodeling of endothelial surface glycosylation.
In liver endothelial cells, transcriptional changes were consistent with age-associated sinusoidal pseudocapillarization.
This provides a potential link between extracellular matrix remodeling and vascular aging.
🧬 5. YAP/TAZ mechanotransduction emerges as an aging-associated pathway
Transcription factor activity inference identified increased activity of mechanoregulatory factors across several aged endothelial populations:
YAP1 | WWTR1/TAZ | TEAD1 | TEAD2 | TEAD4
The strongest evidence emerged from human skin.
Spatial transcriptomics demonstrated enrichment of mechanosignaling-related genes in larger vascular endothelial populations.
Immunofluorescence confirmed increased nuclear localization of YAP in aged skin endothelial cells:
P = 0.0199
These findings suggest that aging alters endothelial responses to mechanical signals.
Importantly, whether increased YAP activity is compensatory or pathogenic remains unresolved.
🧪 6. A p21-associated endothelial senescence program
Researchers investigated whether endothelial senescence could be identified using transcriptional signatures conserved across tissues.
CDKN1A (p21) was broadly detectable, whereas CDKN2A (p16) transcripts were nearly absent in the atlas.
CDKN1A-positive endothelial cells exhibited increased:
• TNF and IL-6 signaling
• Interferon-response programs
• Hypoxia-associated signaling
• DNA damage and stress-response signatures
These changes were observed across multiple tissue contexts.
However, CDKN1A expression alone is not sufficient to establish irreversible cellular senescence.
🔍 7. MAFF emerges as a candidate regulator of endothelial senescence
By integrating atlas-derived signatures with replicative and doxorubicin-induced endothelial senescence models, researchers identified candidate markers including:
MAFF, ADAMTS1, ADAMTS4, JUN, SRGN, KLF2, TNFRSF10D, TNFRSF10B, UGCG, and STX12.
Among these, MAFF emerged as a particularly interesting candidate.
Experimental validation demonstrated:
• Increased MAFF expression in senescent HUVECs.
• Increased MAFF-associated signatures in additional endothelial aging models.
• MAFF overexpression increased p21 expression.
• MAFF overexpression increased senescence-associated β-galactosidase activity.
These experiments support a functional contribution of MAFF to endothelial senescence-associated phenotypes.
However, MAFF loss-of-function experiments and in vivo therapeutic validation remain necessary.
🫀 8. Implications for cardiovascular and metabolic aging
The findings suggest several mechanistic research directions:
Endothelial mechanotransduction
Investigating whether YAP/TAZ–TEAD signaling contributes to age-related vascular stiffness and inflammatory remodeling.
Mitochondrial metabolism
Determining whether reduced endothelial OXPHOS signatures reflect functional mitochondrial impairment and contribute to vascular dysfunction.
Endothelial senescence
Testing MAFF-associated transcriptional programs as potential biomarkers or intervention targets.
Microvascular regeneration
Investigating whether venous endothelial dysfunction contributes to age-associated capillary rarefaction.
Adipose tissue aging
Exploring whether endothelial ECM and glycocalyx remodeling contributes to adipose inflammation, vascular dysfunction, and metabolic deterioration.
These are mechanistic hypotheses rather than therapeutic effects established by the atlas.
💻 9. An openly accessible resource for vascular aging research
The investigators provide an interactive platform for exploring endothelial gene expression across tissues, vascular subtypes, and age groups.
HAECA Portal: haeca.derooijlab.org
Processed atlas: doi.org/10.5281/zenodo.16779…
Bulk RNA-seq: GSE305900
Analysis code: github.com/deRooijLab/HAECA
The resource could facilitate cross-tissue target prioritization and integration with cardiovascular, metabolic, and aging-related disease datasets.
⚠️ Important limitations
The atlas integrates heterogeneous public datasets with uneven age distributions and sampling methods.
Individuals aged 80 years or older were underrepresented.
Clinical covariates, including medication use, metabolic status, and comorbidities, were incompletely available.
Transcriptomic signatures do not necessarily establish changes in protein activity or cellular function.
Although MAFF overexpression induced senescence-associated phenotypes in vitro, the study did not demonstrate that MAFF inhibition reverses vascular aging in vivo.
The broader implication
Vascular aging is not a uniform process affecting every endothelial cell identically.
It combines conserved inflammatory and senescence-associated programs with tissue-specific alterations in angiogenesis, metabolism, extracellular matrix organization, and mechanotransduction.
The HAECA resource provides a foundation for identifying endothelial aging mechanisms and prioritizing potential therapeutic targets.
The next challenge is to move from transcriptional associations to causal mechanisms—and determine which endothelial aging programs can be safely reversed.
📄 Dobner S, Kleissl L, Tóth F, et al.
Uncovering the transcriptional hallmarks of endothelial cell aging via integrated single-cell analysis.
Nature Aging. 2026. Resource article.
DOI: doi.org/10.1038/s43587-026-0…
#VascularAging #EndothelialCells #SingleCellRNAseq #HAECA #Geroscience #CellularSenescence #MAFF #YAP #TAZ #Mechanotransduction #Angiogenesis #Mitochondria #CardiovascularAging #AdiposeTissue #SystemsBiology
IKKβ typically drives chronic inflammation via NFκB and p38 signaling. However, during efferocytosis, this pathway acts transiently to activate the transcription factor Myc, the epigenetic modifier TET2, and the immune checkpoint protein PD-L1.
Frank Paul Mora retweeted
Transient efferocytosis-induced activation of IKKβ reprograms macrophages to promote tissue resolution in mice @NatureComms @ColumbiaMed
nature.com/articles/s41467-0…
Frank Paul Mora retweeted
Olfactory cortex does not store smells in discrete attractor states; instead, it dynamically reshapes the geometric space where odor representations live.
doi.org/10.1016/j.conb.2026.…
Frank Paul Mora retweeted
Carrion crows make decisions faster than monkeys and humans.
Learn more in a new #SciencePerspective: scim.ag/4zmOF1i
Replying to @Alyssa99939270
Because thoughts all relate to other thoughts and those to other thoughts and ...
Frank Paul Mora retweeted
Longitudinal resting-state fMRI data reveal that sustained cannabis use in adolescents alters the developmental trajectory of salience and default-mode network connectivity, a pattern not observed in adults. This age-dependent dissociation provides a potential neural mechanism for why early-onset cannabis use is a strong predictor of later psychosis, suggesting that chronic exposure disrupts the maturation of these networks during critical developmental windows.
biorxiv.org/content/10.64898…
Frank Paul Mora retweeted
In a preprint, invisible phase tagging distinguishes attention between patches sharing the same flicker frequency.
biorxiv.org/content/10.64898…
Frank Paul Mora retweeted
Compartmentalized immune dynamics in amyotrophic lateral sclerosis @NatureMedicine
⬆️Long-lived intrathecal T cell clones -> slower disease progression
⬆️circulating T cells, CMV-specific T cells & antibodiesin CSF -> faster progression
nature.com/articles/s41591-0… @karolinskainst
Frank Paul Mora retweeted
Tumor assembloids recapitulate tumor–CAF–T cell crosstalk in renal cancer @Nature 🇰🇷
nature.com/articles/s41586-0…
Frank Paul Mora retweeted
Once we learn how to solve a problem, we can often solve a similar one in a new place right away. The textbook account says the hippocampus stores each experience separately, and that extracting what experiences share is slow work done elsewhere in the cortex. Tang, Fernandez-Ruiz and colleagues recorded hundreds of hippocampal neurons while mice performed the same memory task, alternating left and right turns, in mazes that looked different.
Individual neurons did not keep the same role from one maze to another. The population did, it carried separate signals for the mouse’s location, the trial it was on and the turn it was about to make and while the location signal reorganized in each maze, the trial and turn signals stayed consistent across them. The authors propose that this preserved structure is what lets a mouse reuse a learned task in a new place and in the preprint, mice that had seen two mazes performed well in a third from the first day. If this holds, the hippocampus supports both keeping memories distinct and generalizing across them, without waiting for the cortex. The evidence comes from mice navigating mazes and how far it extends to human learning remains open.
Tang, W., Chang, H., Liu, C. et al. Circuit mechanisms for disentangled representations and generalization in the hippocampus. Nat Neurosci (2026).
nature.com/articles/s41593-0…
Frank Paul Mora retweeted
The brain appears to keep ordered lists in separate, low-dimensional position-based “slots” in its activity patterns, not by replaying them one at a time.
Neural subspaces encode sequential working memory without detectable neural sequences
nature.com/articles/s41467-0…
#neuroscience
Frank Paul Mora retweeted
Genetic testing in Parkinson’s: We have the technology, but do we have the expertise? What resonates with me about this important new Movement Disorders paper by Alessio Di Fonzo and Francesca Magrinelli is their reminder that genetic testing is advancing faster than our ability to interpret the results and explain what they mean to patients and families. We can now identify genetic changes associated with Parkinson’s disease, dystonia, ataxia, and other movement disorders, sometimes opening doors to targeted treatments and clinical trials. But finding a genetic variant is not the same as understanding its significance. For example, carrying a GBA1 or LRRK2 variant does not necessarily mean someone will develop Parkinson’s disease, and a result that is misunderstood can create unnecessary anxiety or lead to inappropriate medical decisions. The authors provide compelling clinical examples in which expert interpretation changed a diagnosis, identified a treatable condition, or uncovered an important risk for family members. I particularly agree with their call to train more neurologists in neurogenetics, integrate genetic counselors into our clinical teams, and create dedicated positions for specialists who can translate complex genetic findings into meaningful care. As we move toward precision medicine, I worry that we are investing heavily in sequencing technology without making equivalent investments in the people who must interpret and communicate the results. My takeaway is simple: A genetic test should never be the end of the conversation. It should be the beginning of better-informed, more personalized care.
movementdisorders.onlinelibr…
Frank Paul Mora retweeted
Meet the ivy cell: described by Fuentealba and colleagues in 2008, this hippocampal GABAergic neuron spreads a dense, ivy-like axonal web. It produces nitric oxide and delivers slow inhibition to pyramidal dendrites, regulating their excitability. #Neuroscience
Frank Paul Mora retweeted
"Measure it to CURE it"
This is worth the energy expenditure. Sign up and Vote!! Patient diagnostics are one of the BIG missing pieces in chronic illness recovery. Objective diagnostic methods need to be cheap and home-based. I think the tech is already out there (with wearables) and techniques like capillaroscopy - but they need to be adequately studied.
I am a big supporter of @ImmunoFever research and the MAESTRO team. Help her get to the top!
Help!!!! Any advice appreciated!!! We just lost our strong lead in the HHS TOPx voting and I want to get the word out about what we're trying to do and what a difference it makes to get objective measures! Any tips appreciated (also votes and comments)!!! invisibleillness.crowdicity.…
Frank Paul Mora retweeted
Cardiovascular resilience in centenarians
nature.com/articles/s41569-0…
Replying to @m_rainboow
A beginners two value truth table in different notation is relatively common.
Frank Paul Mora retweeted
Review @CellReports
Oral vaccine delivery systems: Gastrointestinal barriers, gut microbiota, and emerging engineering strategies
cell.com/cell-reports/fullte…
























