Providing nextRAD genotyping services, and Oxford Nanopore microbial & plasmid sequencing with the plasmidsaurus service
Eugene, OR
Joined November 2012
- Tweets333
- Following111
- Followers372
- Likes295
SNPsaurus retweeted
For bacterial genome sequencing, would you pick fast, good, or cheap? Now you can get ALL 3 with our new ONT sequencing service that almost always produces circular, full-length bacterial chromosome contigs with consensus accuracy >Q50 -- often with their full plasmids too! (1/3)
SNPsaurus retweeted
Today seems like a good day to announce some improvements we've had in the works:
1. We promised lower prices as our sequencing volume increased, and thanks to our wonderful customers, as of right now we are dropping our price from $25 to $15/sample! (1/6)
SNPsaurus retweeted
This article hits a pet peeve of mine. It says "RADSeq" in the title but it uses the ddRAD method. This is important because the study is a diverse genus of moth. Not a diverse species, but 43 samples and 32 species. Why does that matter? 1/n
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SNPsaurus retweeted
We had several requests for extension - so now closing this Sunday (Jul 14 PDT)!
calacademy.snaphire.com/jobd…
Looking for a postdoc (2.5yrs) to join my lab at the @calacademy! Come work with us on an exciting new #HopeForReefs project, leveraging genomics to study reef-wide patterns of scleractinian coral diversity. Please RT 🙏
Ad: calacademy.snaphire.com/jobd…
Lab: pimbongaerts.com/people 🚧
SNPsaurus retweeted
@NEBiolabs Q5 High-Fidelity DNA Polymerase is gaining ground on Phusion polymerase, according to citations in the literature. Visit labblab.com for insights like these and try our tools to identify which researchers are using different kits and products.
SNPsaurus retweeted
Indeed, it often makes sense to do @PacBio microbial projects at service providers like @SNPsaurus @GenomeScience @umngenomics where the per microbe cost has come down significantly with multiplexing on the Sequel System
SNPsaurus retweeted
The RAD-seq paper just passed 2000 citations. Great group of people involved--Nate Baird (now at @illumina) and Paul Etter (at @SNPsaurus with me) worked through the details and Bill Cresko @wcresko gave insights and collegiality. Pleased @PLOSONE published it w/ wide readership.
SNPsaurus retweeted
Comprehensive evaluation of non-hybrid genome assembly tools for PacBio data academic.oup.com/bib/article…
SNPsaurus retweeted
Canu ranked 1st in a #PacBio assemblers evaluation. Good efficiency managing #repeats. MECAT 2nd and FALCON 3rd. academic.oup.com/bib/article…
SNPsaurus retweeted
In the NW, interested in long-read sequencing? Check out our seminars 11/1&11/3 at @uoregon @WSUPullman @OregonState pacb.com/company/news-events…
SNPsaurus retweeted
.@uoregon Seminar next Friday 11/3: SMRT Sequencing for Smart Genomics, 2:00 - 3:45 Streisinger Hall Novick Room 225 ow.ly/9xGo30gb89v
SNPsaurus retweeted
Symbiodinium C1 & F genome assemblies (RT @dorkyM): biorxiv.org/content/early/20… download: cloudstor.aarnet.edu.au/plus…
SNPsaurus retweeted
We have (finally) posted corrections to our model on using reduced representation to identify sweeps. sciencedirect.com/science/ar… 1/4
SNPsaurus retweeted
freebayes is now 4x faster and many times lighter in RAM thanks to @JeremiahWala's integration of SeqLib github.com/ekg/freebayes/pul… !!!
SNPsaurus retweeted
Today on #SciMon, RAD-Seq: restriction site-associated DNA seq for ecology, evolution, & conservation efforts bit.ly/2cUxDSc
SNPsaurus retweeted
Thanks Samia. Here the link for the preprint: biorxiv.org/content/early/20…
SNPsaurus retweeted
Stacks v1.38: gapped alignments now supported across the pipeline; large speedups; depth of coverage reporting catchenlab.life.illinois.edu…
SNPsaurus retweeted
RAD-seq seems to be popular for resolving phylogenetic relationships of closely related species! xitter.gq/phy_papers/status/6524…
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